{bionix}: with bionix; let R = pkgs.rWrapper.override {packages = with pkgs.rPackages; [edgeR];}; counts = pkgs.fetchurl { url = "https://raw.githubusercontent.com/ucdavis-bioinformatics-training/2018-September-Bioinformatics-Prerequisites/master/friday/counts.tsv"; sha256 = "sha256-ZmZ+vC4mKnmZKVJqbnEujDngwnSTZAxvQaZaNClUUWE="; }; in stage { inherit counts; name = "r-ex"; buildInputs = [R]; buildCommand = '' Rscript ${./script.R} ''; }