aboutsummaryrefslogtreecommitdiff
path: root/slides.tex
diff options
context:
space:
mode:
Diffstat (limited to 'slides.tex')
-rw-r--r--slides.tex47
1 files changed, 41 insertions, 6 deletions
diff --git a/slides.tex b/slides.tex
index 6b0b271..2a2cdad 100644
--- a/slides.tex
+++ b/slides.tex
@@ -2,8 +2,10 @@
\usepackage{microtype}
\usepackage{tikz}
+\usetikzlibrary{fit}
\definecolor{bngreen}{HTML}{3c8e64}
+\definecolor{bnorange}{HTML}{e08919}
%\setbeamercolor*{structure}{bg=white,fg=bngreen}
\usecolortheme[named=bngreen]{structure}
\setbeamertemplate{navigation symbols}{}
@@ -24,13 +26,46 @@
\begin{frame}
\begin{center}
- \begin{tikzpicture}[->,>=stealth,shorten >=1pt,auto,node distance=1.5cm,thick]
- \node (a) {align};
- \node (s) [below of=a] {sort};
- \node (c) [below of=s] {variant calling};
+ \begin{tikzpicture}[->,>=stealth,shorten >=1pt,auto,node distance=2cm,thick]
+ \node (a) {align};
+ \node (s) [below of=a] {sort};
+ \node (c) [below of=s] {calling};
- \path (a) edge node {} (s);
- \end{tikzpicture}
+ \path (a) edge node {} (s);
+ \path (s) edge node {} (c);
+
+ \pause
+
+ \node (input) [above of=a] {input};
+ \path (input) edge node {} (a);
+ \node (ref) [right of=a] {reference};
+ \path (ref) edge node {} (a);
+ \node (db) [right of=c] {dbNSFP};
+ \path (db) edge node {} (c);
+
+ \pause
+
+ \node (bwa) [left of=a] {BWA};
+ \path (bwa) edge node {} (a);
+ \node (samtools) [left of=s] {samtools};
+ \path (samtools) edge node {} (s);
+ \node (platypus) [left of=c] {platypus};
+ \path (platypus) edge node {} (c);
+
+ \pause
+
+ \node (glib) [left of=samtools] {glibc,$\cdots$};
+ \node (python) [left of=platypus] {python};
+ \path (glib) edge node {} (bwa);
+ \path (glib) edge node {} (samtools);
+ \path (python) edge node {} (platypus);
+ \path (glib) edge node {} (python);
+
+ \pause
+
+ \node[draw=bngreen, fit=(bwa) (samtools) (platypus) (glib) (python),label=containers](cont){};
+ \node[draw=bnorange, fit=(ref) (db),label=tarball](tar){};
+ \end{tikzpicture}
\end{center}
\end{frame}