diff options
Diffstat (limited to 'test-tnpair.nix')
| -rw-r--r-- | test-tnpair.nix | 1 |
1 files changed, 0 insertions, 1 deletions
diff --git a/test-tnpair.nix b/test-tnpair.nix index e7d5d17..679cc67 100644 --- a/test-tnpair.nix +++ b/test-tnpair.nix @@ -82,7 +82,6 @@ let "strelka.snvs.vcf" = tnpairResult.variants.snvs; "strelka.gl.vcf" = tnpairResult.glvariants; delly = delly.call { } (with tnpairResult.alignments; [ normal tumour ]); - lumpy = lumpy.call { } (with tnpairResult.alignments; [ normal tumour ]); manta = manta.call { } (with tnpairResult.alignments; { normals = [ normal tumour ]; }); mantaTN = manta.call { } (with tnpairResult.alignments; { normals = [ normal ]; inherit tumour; }); mantaT = manta.call { } (with tnpairResult.alignments; { inherit tumour; }); |