diff options
Diffstat (limited to 'tools/samtools-faidx.nix')
| -rw-r--r-- | tools/samtools-faidx.nix | 4 |
1 files changed, 3 insertions, 1 deletions
diff --git a/tools/samtools-faidx.nix b/tools/samtools-faidx.nix index 0dc03ee..a399857 100644 --- a/tools/samtools-faidx.nix +++ b/tools/samtools-faidx.nix @@ -13,6 +13,8 @@ stdenv.mkDerivation { name = "samtools-faidx"; buildInputs = [ samtools ]; buildCommand = '' - samtools faidx ${optionalString (flags != null) flags} ${input} > $out + ln -s ${input} input.fasta + samtools faidx ${optionalString (flags != null) flags} input.fasta + cp input.fasta.fai $out ''; } |