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-rw-r--r--tools/platypus-callVariants.nix1
1 files changed, 0 insertions, 1 deletions
diff --git a/tools/platypus-callVariants.nix b/tools/platypus-callVariants.nix
index abe2a6b..bb0faf1 100644
--- a/tools/platypus-callVariants.nix
+++ b/tools/platypus-callVariants.nix
@@ -28,7 +28,6 @@ stage {
ln -s ${bionix.samtools.faidx indexAttrs ref} ref.fa.fai
${concatMapStringsSep "\n" (p: "ln -s ${p} ${filename p}.bam") inputs}
${concatMapStringsSep "\n" (p: "ln -s ${bionix.samtools.index bamIndexAttrs p} ${filename p}.bai") inputs}
- ls -l
platypus callVariants \
--nCPU=$NIX_BUILD_CORES \
--refFile=ref.fa \