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path: root/lib/qsub.nix
AgeCommit message (Collapse)Author
2021-10-29treewide reformatting and simplificationJustin Bedo
- simplify with statix - reformat with nixpkgs-fmt
2020-06-23qsub,slurm: fix string escaping bugJustin Bedo
escapeShellArgs calls toString on the passed item, which for paths converts it to a string containing the full path outside the nix store. Avoid this by calling escapeShellArg on strings only.
2019-06-11qsub: parameterise the path to PBS utilsJustin Bedo
2019-03-15add multicore passthru flagJustin Bedo
2019-03-04qsub: fix bugJustin Bedo
2019-03-01qsub: fix temporary directory cleanupJustin Bedo
2019-02-06qsub: rename flags to qsubFlags to avoid collisionJustin Bedo
2019-02-06qsub: parameterise queue and allow arbitrary flags to be passedJustin Bedo
2019-01-14qsub: fix bug in stderr redirectionJustin Bedo
2018-12-21qsub: capture stderr and stdout jointlyJustin Bedo
2018-12-20qsub: bugfix with printing jobid for debuggingJustin Bedo
2018-12-19qsub: echo out PBS_NODE_ID to ease debuggingJustin Bedo
2018-12-18qsub: refactor overridingJustin Bedo
2018-12-11qsub: prefix directories to prevent cleanup deleting top level dirJustin Bedo
2018-12-10qsub: fix $TMPDIR locationJustin Bedo
2018-11-26qsub: output non-retryable errorsJustin Bedo
2018-11-26qsub: let sleep timing be configurableJustin Bedo
2018-11-26qsub: retry qsub if requestedJustin Bedo
2018-11-23qsub: update to check job_state fieldJustin Bedo
2018-11-23qsub: be more specific with qstat pollingJustin Bedo
2018-10-22name qsub with name of derivation: fixes #7Justin Bedo
2018-09-28Improve cleanup of qsubJustin Bedo
2018-09-27Allow changing tmpdir for qsubJustin Bedo
2018-09-26fix qsub expressionJustin Bedo
2018-09-26Add qsub to bionix top levelJustin Bedo
2018-09-20Wrap some tools and make an example pipelineJustin Bedo
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