| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2022-02-09 | don't strip store paths from bams | Justin Bedo | |
| Due to BAM compression attempting to strip store paths is a waste of time. | |||
| 2021-12-06 | parameterise RG line as nix attribute set | Justin Bedo | |
| Allows more seamless transitioning between alingment algorithms | |||
| 2021-10-29 | treewide reformatting and simplification | Justin Bedo | |
| - simplify with statix - reformat with nixpkgs-fmt | |||
| 2021-07-28 | bugfix: use unsorted type for alignment output | Justin Bedo | |
| Most aligners are only pseudo-name sorted (i.e., pairs adjacant). | |||
| 2019-04-08 | bowtie: sort the output to ensure determinism | Justin Bedo | |
| 2019-03-15 | add multicore passthru flag | Justin Bedo | |
| 2019-01-09 | large refactor | Justin Bedo | |
| - use bionix.pkgs instead of nixpkgs - replace stdenv.mkDerivation with stage | |||
| 2018-12-10 | bowtie: init | Justin Bedo | |
 |
index : bionix.git | |
| Functional, highly-reproducible bioinformatics pipelines |
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