From 270a4b2bd06f2c380429fee66c7398fad1bdbc1a Mon Sep 17 00:00:00 2001 From: Justin Bedo Date: Thu, 14 Oct 2021 16:29:48 +1100 Subject: Revert "gridss: 2.12.0 -> 2.12.1" This reverts commit 1ff1c9cf0bcc95a6555d1217598f55b7b9eae866. As per github release page: DO NOT USE: this release has a critical bug in the preprocessing step that removes all split reads --- tools/gridss.nix | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/tools/gridss.nix b/tools/gridss.nix index a002e69..bf7c518 100644 --- a/tools/gridss.nix +++ b/tools/gridss.nix @@ -5,9 +5,8 @@ with lib; rec { jar = pkgs.fetchurl { - url = - "https://github.com/PapenfussLab/gridss/releases/download/v2.12.1/gridss-2.12.1-gridss-jar-with-dependencies.jar"; - sha256 = "sha256-wH5O+vYKlWGDJTTnMgKYrSNtzoU7wDHqNraiW8xrxXA="; + url = "https://github.com/PapenfussLab/gridss/releases/download/v2.12.0/gridss-2.12.0-gridss-jar-with-dependencies.jar"; + sha256 = "sha256-GLLA1pfGuN6xkvO9iALkifkNJhTBtbyCaWaKxDujRGc="; }; /* Generate configuration file for GRIDSS. Takes attribute sets to GRIDSS ini style format. -- cgit v1.2.3