From 852eae6261f83bcf70f639843dea1213347a0b0e Mon Sep 17 00:00:00 2001 From: Justin Bedo Date: Wed, 26 Sep 2018 11:43:42 +1000 Subject: Add qsub to bionix top level --- default.nix | 2 ++ lib/qsub.nix | 2 ++ 2 files changed, 4 insertions(+) diff --git a/default.nix b/default.nix index a5c9f3f..6050857 100644 --- a/default.nix +++ b/default.nix @@ -11,5 +11,7 @@ let ref = callBionix ./references.nix; samtools = callBionix ./tools/samtools.nix; strelka = callBionix ./tools/strelka.nix; + + qsub = nixpkgs.callPackage ./lib/qsub.nix {}; }); in bionix diff --git a/lib/qsub.nix b/lib/qsub.nix index ba9456f..e53a36c 100644 --- a/lib/qsub.nix +++ b/lib/qsub.nix @@ -1,5 +1,7 @@ {lib}: +with lib; + { ppn ? 1, mem ? 1, walltime ? "24:00:00" }: drv: lib.overrideDerivation drv ({ args, builder, ... }: { builder = "/bin/bash"; -- cgit v1.2.3