From fce03fcbdbea445bc058348db30ccb99274d3f96 Mon Sep 17 00:00:00 2001 From: Justin Bedo Date: Tue, 27 Nov 2018 12:50:46 +1100 Subject: Expand README and add simple example pipeline --- README.md | 20 +++++++++++++++++++- 1 file changed, 19 insertions(+), 1 deletion(-) (limited to 'README.md') diff --git a/README.md b/README.md index d71b0e5..92817c2 100644 --- a/README.md +++ b/README.md @@ -1,2 +1,20 @@ # bionix -Nix functions for use in bioinformatics, and a sample DE analysis + +Bionix is a set of [Nix](http://nixos.org/nix) expressions for specifying and +executing bioinformatics pipelines. It is currently a work in progress, so +documentation is sparse. + +## Getting started + +Install [Nix](http://nixos.org/nix) and then try `nix-build` in the examples +directory. + +## Example pipeline + +The examples directory shows a simple pipeline in the call.nix and default.nix +files. You can build it with `nix-build` in the examples directory. The result +will be linked to ./result, which in this example case is an empty VCF file. + +## Contact + +Please come chat with us at [#bionix:cua0.org](http://matrix.to/#/#bionix:cua0.org). -- cgit v1.2.3