From dc448fa97dfc683ccd491fc4a00e58b6d0f150ef Mon Sep 17 00:00:00 2001
From: Justin Bedo <cu@cua0.org>
Date: Tue, 11 Jun 2019 18:10:13 +1000
Subject: qsub: parameterise the path to PBS utils

---
 default.nix | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'default.nix')

diff --git a/default.nix b/default.nix
index edb9377..c951ac9 100644
--- a/default.nix
+++ b/default.nix
@@ -43,7 +43,7 @@ let
       exec = f: x: y: slurm (builtins.intersectAttrs slurmDefs x) (f (builtins.removeAttrs x (builtins.attrNames slurmDefs)) y);
       });
     qsub = attrs: bionix.extend (self: super: with self; rec {
-      qsubDefs = { ppn = 1; mem = 1; walltime = "24:00:00"; tmpDir = "/tmp"; sleepTime = 60; queue = null; qsubFlags = null; } // attrs;
+      qsubDefs = { ppn = 1; mem = 1; walltime = "24:00:00"; tmpDir = "/tmp"; sleepTime = 60; queue = null; qsubFlags = null;  qsubPath = "/usr/bin"; } // attrs;
       qsub = attrs: (callPackage ./lib/qsub.nix {}) (qsubDefs // attrs);
       exec = f: x: y: qsub (builtins.intersectAttrs qsubDefs x) (f (builtins.removeAttrs x (builtins.attrNames qsubDefs)) y);
     });
-- 
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