From 1b5e2b206d00967100e4ddf48c48ba0662bb0eb9 Mon Sep 17 00:00:00 2001
From: Justin Bedo <cu@cua0.org>
Date: Thu, 10 Jan 2019 11:42:15 +1100
Subject: ref: add UCSC gene annotations

---
 lib/references.nix | 8 ++++++++
 1 file changed, 8 insertions(+)

(limited to 'lib')

diff --git a/lib/references.nix b/lib/references.nix
index 2e5e937..cf9b7ef 100755
--- a/lib/references.nix
+++ b/lib/references.nix
@@ -94,6 +94,14 @@ rec {
           };
         };
       };
+      UCSCgenes = stage {
+        name = "UCSCgenes";
+        src = pkgs.fetchurl {
+          url = "http://hgdownload.soe.ucsc.edu/goldenPath/hg19/database/refFlat.txt.gz";
+          sha256 = "0jfrsmrp6386lw9wq48rs5i0qmm3ijb7ardhkcp29bzvbwf9lqaq";
+        };
+        buildCommand = "gunzip < $src > $out";
+      };
     };
 
     grcm38 = grcm38-p6;
-- 
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