From 8f4b321c07f13ebe8597d1ab4ef3c6bda16f38af Mon Sep 17 00:00:00 2001
From: Justin Bedo <cu@cua0.org>
Date: Thu, 9 May 2019 13:42:29 +1000
Subject: fastp: rename run to check for consistency with fastqc

---
 test-tnpair.nix | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'test-tnpair.nix')

diff --git a/test-tnpair.nix b/test-tnpair.nix
index 802a2bb..153a4c3 100644
--- a/test-tnpair.nix
+++ b/test-tnpair.nix
@@ -16,7 +16,7 @@ let
   nameSort = samtools.sort {nameSort = true;};
   flagstat = samtools.flagstat {};
   check-fastqc = fastqc.check {};
-  check-fastp = fastp.run {};
+  check-fastp = fastp.check {};
   callVariants = strelka.callSomatic {};
   markdup = samtools.markdup {};
   fixmate = samtools.fixmate {};
-- 
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