From 92da3257c6867b6f54943e39345ab295703a30c4 Mon Sep 17 00:00:00 2001
From: Justin Bedo <cu@cua0.org>
Date: Thu, 15 Aug 2019 14:27:43 +1000
Subject: hisat2: init

---
 test-tnpair.nix | 1 +
 1 file changed, 1 insertion(+)

(limited to 'test-tnpair.nix')

diff --git a/test-tnpair.nix b/test-tnpair.nix
index eaabd9f..0f2b55d 100644
--- a/test-tnpair.nix
+++ b/test-tnpair.nix
@@ -61,6 +61,7 @@ let
     "minimap2-normal.bam" = minimap2.align {inherit ref; preset = "sr"; } tnpair.normal.files;
     "snap-normal.bam" = snap.align {inherit ref; } tnpair.normal.files;
     "${tnpair.tumour.name}.flagstat" = flagstat tnpairResult.alignments.tumour;
+    "hisat2-normal.bam" = hisat2.align {inherit ref;} tnpair.normal.files;
   };
 
   testNaming = linkOutputs {
-- 
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