From e136c6f6027bcc125f3ab7885e37d79380a81e54 Mon Sep 17 00:00:00 2001
From: Justin Bedo <cu@cua0.org>
Date: Tue, 17 Dec 2019 12:30:59 +1100
Subject: Fix shard test

---
 test-tnpair.nix | 5 +----
 1 file changed, 1 insertion(+), 4 deletions(-)

(limited to 'test-tnpair.nix')

diff --git a/test-tnpair.nix b/test-tnpair.nix
index 8d9dc88..ae88549 100644
--- a/test-tnpair.nix
+++ b/test-tnpair.nix
@@ -41,10 +41,7 @@ let
     glvariants = strelka.call {} (builtins.attrValues alignments);
     platypusVars = platypus.call {} (builtins.attrValues alignments);
     octopusVars = octopus.call {} (builtins.attrValues alignments);
-    shards = pipe [
-      (shard.fastQPair 2)
-      (map (bwa.align {inherit ref;}))
-    ] normal.files;
+    shards = map (bwa.align {inherit ref;}) (shard.fastQPair 2 normal.files);
   };
 
   tnpairResult = processPair tnpair;
-- 
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