From d98c0d62587ffb4b6f7106d07dfa16de729dbc8e Mon Sep 17 00:00:00 2001 From: Justin Bedo Date: Sun, 13 Jan 2019 08:50:32 +1100 Subject: snpeff: fix dbnsfp --- tools/snpeff-dbnsfp.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) (limited to 'tools') diff --git a/tools/snpeff-dbnsfp.nix b/tools/snpeff-dbnsfp.nix index 5e7c91a..dd94760 100644 --- a/tools/snpeff-dbnsfp.nix +++ b/tools/snpeff-dbnsfp.nix @@ -14,7 +14,7 @@ stage { buildCommand = '' ln -s ${dbnsfp.db} dbNSFP.txt.gz ln -s ${dbnsfp.index} dbNSFP.txt.gz.tbi - snpeff dbnsfp -db dbNSFP.txt.gz ${input} > $out + snpsift dbnsfp -db dbNSFP.txt.gz ${input} > $out ''; buildInputs = [ snpeff ]; passthru.filetype = input.filetype; -- cgit v1.2.3