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Subclonal phylogeny inference
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Author
2025-03-19
experimental extension to CN changes
Justin Bedo
2025-03-07
update to latest ppl
HEAD
master
Justin Bedo
2025-02-27
add single site mh
Justin Bedo
2025-02-26
output MML score
Justin Bedo
2023-01-30
code formatting
Justin Bedo
2023-01-27
drop default mutation rate to 1%
Justin Bedo
2023-01-27
bump ppl
Justin Bedo
2023-01-26
add progress bar
Justin Bedo
2023-01-25
split out tree drawing code into separate executable
Justin Bedo
2023-01-25
separate dot drawing into standalone program
Justin Bedo
2023-01-25
fix bionomial and improve stirling approximation
Justin Bedo
2023-01-24
faster choose
Justin Bedo
2023-01-24
use binomial
Justin Bedo
2023-01-23
bump ppl
Justin Bedo
2023-01-20
remove heterozygous state from likelihood
Justin Bedo
2023-01-17
compact data structure
Justin Bedo
2023-01-17
scale graph nodes to parent
Justin Bedo
2023-01-17
simplify code
Justin Bedo
2023-01-16
dot graph output
Justin Bedo
2023-01-16
fix length
Justin Bedo
2023-01-16
generalise to any number of samples
Justin Bedo
2023-01-16
add command line arguments
Justin Bedo
2023-01-16
init
Justin Bedo