@article{Aitchison1982, doi = {10.1111/j.2517-6161.1982.tb01195.x}, url = {https://doi.org/10.1111/j.2517-6161.1982.tb01195.x}, year = {1982}, month = jan, publisher = {Wiley}, volume = {44}, number = {2}, pages = {139--160}, author = {J. Aitchison}, title = {The Statistical Analysis of Compositional Data}, journal = {Journal of the Royal Statistical Society: Series B (Methodological)} } @article{collins2001generalization, title={A generalization of principal components analysis to the exponential family}, author={Collins, Michael and Dasgupta, Sanjoy and Schapire, Robert E}, journal={Advances in Neural Information Processing Systems}, volume={14}, year={2001} } @BOOK{Amari2016-ua, title = "Information geometry and its applications", author = "Amari, Shun-Ichi", publisher = "Springer", series = "Applied Mathematical Sciences", edition = 1, month = feb, year = 2016, address = "Tokyo, Japan", language = "en" } @article{nock2016scaled, title={A scaled Bregman theorem with applications}, author={Nock, Richard and Menon, Aditya and Ong, Cheng Soon}, journal={Advances in Neural Information Processing Systems}, volume={29}, year={2016} } @article{avalos2018representation, title={Representation learning of compositional data}, author={Avalos, Marta and Nock, Richard and Ong, Cheng Soon and Rouar, Julien and Sun, Ke}, journal={Advances in Neural Information Processing Systems}, volume={31}, year={2018} } @article{Findlay2018, doi = {10.1038/s41586-018-0461-z}, url = {https://doi.org/10.1038/s41586-018-0461-z}, year = {2018}, month = sep, publisher = {Springer Science and Business Media {LLC}}, volume = {562}, number = {7726}, pages = {217--222}, author = {Gregory M. Findlay and Riza M. Daza and Beth Martin and Melissa D. Zhang and Anh P. Leith and Molly Gasperini and Joseph D. Janizek and Xingfan Huang and Lea M. Starita and Jay Shendure}, title = {Accurate classification of {BRCA}1 variants with saturation genome editing}, journal = {Nature} } @article{Gajula2014, doi = {10.1093/nar/gku689}, url = {https://doi.org/10.1093/nar/gku689}, year = {2014}, month = jul, publisher = {Oxford University Press ({OUP})}, volume = {42}, number = {15}, pages = {9964--9975}, author = {Kiran S. Gajula and Peter J. Huwe and Charlie Y. Mo and Daniel J. Crawford and James T. Stivers and Ravi Radhakrishnan and Rahul M. Kohli}, title = {High-throughput mutagenesis reveals functional determinants for {DNA} targeting by activation-induced deaminase}, journal = {Nucleic Acids Research} } @article{Elazar2016, doi = {10.7554/elife.12125}, url = {https://doi.org/10.7554/elife.12125}, year = {2016}, month = jan, publisher = {{eLife} Sciences Publications, Ltd}, volume = {5}, author = {Assaf Elazar and Jonathan Weinstein and Ido Biran and Yearit Fridman and Eitan Bibi and Sarel Jacob Fleishman}, title = {Mutational scanning reveals the determinants of protein insertion and association energetics in the plasma membrane}, journal = {{eLife}} }