conda proof of concept

1 files changed, 19 insertions, 0 deletions

diff --git a/conda.nix b/conda.nix
new file mode 100644
index 0000000..4006218
--- /dev/null
+++ b/conda.nix
@@ -0,0 +1,19 @@
+{pkgs ? import <nixpkgs> {}}:
+
+with pkgs;
+
+stdenv.mkDerivation {
+  name = "conda";
+  src = ./conda.nix;
+  phases = [ "buildPhase" ];
+  buildInputs = [ conda ];
+  buildPhase = ''
+    HOME=$TMPDIR
+    conda-shell-4.3.31 << EOF
+    conda-install
+    conda config --add channels bioconda
+    conda install -y bwa
+    bwa
+    EOF
+  '';
+}