diff options
| author | Justin Bedo <cu@cua0.org> | 2019-05-02 12:17:24 +1000 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2019-05-02 12:17:24 +1000 |
| commit | 11b31bdad648c9af92ac6997303bc10849a7a2ef (patch) | |
| tree | da66de976952417bfaec0d21b39bf555d1b6b526 /default.nix | |
| parent | e7a2705bb3818db7647c7a37ef675760c323bd26 (diff) | |
shard: Implement some basic sharding for FQ files
Diffstat (limited to 'default.nix')
| -rw-r--r-- | default.nix | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/default.nix b/default.nix index d67f2eb..61f2974 100644 --- a/default.nix +++ b/default.nix @@ -68,9 +68,12 @@ let fetchFastQGZ = attrs: with types; tagFiletype (filetype.gz (filetype.fq {})) (fetchurl attrs); fetchFastAGZ = attrs: with types; tagFiletype (filetype.gz (filetype.fa {})) (fetchurl attrs); + # Turn a multi-output derivation into a list of derivations + outputDrvs = drv: map (o: lib.getAttr o drv) drv.outputs; + # Export nixpkgs and standard library lib pkgs = nixpkgs; - lib = nixpkgs.lib // { types = types; }; + lib = nixpkgs.lib // { types = types; shard = callBionix ./lib/shard.nix {};}; stage = x@{ name, ... }: { multicore = false; } // nixpkgs.stdenvNoCC.mkDerivation (x // {name = "bionix-" + name;}); # splitting/joining |