diff options
author | Justin Bedo <cu@cua0.org> | 2019-02-06 10:18:20 +1100 |
---|---|---|
committer | Justin Bedo <cu@cua0.org> | 2019-02-06 10:27:52 +1100 |
commit | 5e2c7c85d001fde0600e77bfbd9d1078fcd561f4 (patch) | |
tree | c4ed092a5c45858f44dbaf17defd7d14dc019c9c /default.nix | |
parent | 71a9142f58f0e9e738ca1450b91b4672ed41521d (diff) |
qsub: parameterise queue and allow arbitrary flags to be passed
Diffstat (limited to 'default.nix')
-rw-r--r-- | default.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/default.nix b/default.nix index f3a582b..bd68277 100644 --- a/default.nix +++ b/default.nix @@ -32,7 +32,7 @@ let strelka = callBionix ./tools/strelka.nix {}; qsub = attrs: bionix.extend (self: super: with self; rec { - qsubDefs = { ppn = 1; mem = 1; walltime = "24:00:00"; tmpDir = "/tmp"; sleepTime = 60; } // attrs; + qsubDefs = { ppn = 1; mem = 1; walltime = "24:00:00"; tmpDir = "/tmp"; sleepTime = 60; queue = null; flags = null; } // attrs; qsub = attrs: (callPackage ./lib/qsub.nix {}) (qsubDefs // attrs); exec = f: x: y: qsub (builtins.intersectAttrs qsubDefs x) (f (builtins.removeAttrs x (builtins.attrNames qsubDefs)) y); }); |