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authorJustin Bedo <cu@cua0.org>2019-03-06 13:18:41 +1100
committerJustin Bedo <cu@cua0.org>2019-03-06 13:18:41 +1100
commit1ff9422ec0ab086a97c4acab5c8f4d15c2026172 (patch)
treee30d643b4750e23478ccc7388353e8ca491c4c2f /doc
parenta86ef4eda927c47791dc0c25852c13ea622f809b (diff)
api docs: init bowtie
Diffstat (limited to 'doc')
-rw-r--r--doc/tools-doc.nix1
-rw-r--r--doc/tools.xml1
2 files changed, 2 insertions, 0 deletions
diff --git a/doc/tools-doc.nix b/doc/tools-doc.nix
index b2cd7ba..e510209 100644
--- a/doc/tools-doc.nix
+++ b/doc/tools-doc.nix
@@ -24,6 +24,7 @@ stage {
nixdoc -c "$1" -d "$2" -f "$1.nix" | sed 's/lib\./bionix./g' |grep -v locations.xml > "$1.xml"
}
+ docgen bowtie 'Bowtie aligner'
docgen bwa 'BWA aligner'
docgen strelka 'Strelka2 variant caller'
diff --git a/doc/tools.xml b/doc/tools.xml
index f23dfeb..6b76bf7 100644
--- a/doc/tools.xml
+++ b/doc/tools.xml
@@ -8,6 +8,7 @@
xmlns:xi="http://www.w3.org/2001/XInclude"
xml:id="sec-tools">
<title>Tools</title>
+ <xi:include href="bowtie.xml" />
<xi:include href="bwa.xml" />
<xi:include href="strelka.xml" />
</section>