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| author | Justin Bedo <cu@cua0.org> | 2020-03-27 10:59:44 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2020-03-27 10:59:44 +1100 |
| commit | d4fe5ce2aaea3f951fe21094ccfa90360c12c760 (patch) | |
| tree | 7a13fa9590fa70271c4da465ae02b6bca1e1879e /examples/call.nix | |
| parent | 7a80f94a3aa69072e25b92098a746778707cb7d6 (diff) | |
update exampes to use nixpkgs.lib.pipe
Diffstat (limited to 'examples/call.nix')
| -rw-r--r-- | examples/call.nix | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/examples/call.nix b/examples/call.nix index 0e4ea05..90832ee 100644 --- a/examples/call.nix +++ b/examples/call.nix @@ -7,9 +7,10 @@ ,ref ? bionix.ref.grch38.seq }: with bionix; +with lib; let - preprocess = pipe [ + preprocess = flip pipe [ (bwa.align { inherit ref; }) (samtools.fixmate {}) (samtools.sort {}) |