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authorl-d-s <distefano.l@wehi.edu.au>2018-11-13 09:10:23 +1100
committerl-d-s <distefano.l@wehi.edu.au>2018-11-13 09:10:23 +1100
commit2c92dd5c6425c67a18ab07eba7f15c07dbd4614a (patch)
tree46be9656b500e38bd4aa47066ce8296a127dd5bf /tools/bwa-mem.nix
parent886af7beaaa98ac32db88a7453d917409cf11ae8 (diff)
parent4574deb8e1649eaf63df424585d11645c7cfa7dd (diff)
Merge branch 'master' of https://github.com/PapenfussLab/bionix
Diffstat (limited to 'tools/bwa-mem.nix')
-rw-r--r--tools/bwa-mem.nix2
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/bwa-mem.nix b/tools/bwa-mem.nix
index 3420294..2b3bc64 100644
--- a/tools/bwa-mem.nix
+++ b/tools/bwa-mem.nix
@@ -17,7 +17,7 @@ with bionix.compression;
let
fa = f: matchFiletype "bwa-ref" { fa = _: f; } f;
- fq = f: matchFiletype "bwa-input" { fq = _: f; } f;
+ fq = f: matchFiletype "bwa-input" { fq = _: f; gz = matchFiletype' "bwa-input" { fq = _: f; }; } f;
in stdenv.mkDerivation {
name = "bwa-mem";