diff options
author | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
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committer | Justin Bedo <cu@cua0.org> | 2021-10-29 17:39:01 +1100 |
commit | bac9248a5e08e8afdf5485a6e27cfe72e1ca5090 (patch) | |
tree | 8719a280b56122017d46b582cd3da8547dd3f548 /tools/bwa.nix | |
parent | ab809b8c77efdad9fb54d3591a0193a1cbe888d1 (diff) |
treewide reformatting and simplification
- simplify with statix
- reformat with nixpkgs-fmt
Diffstat (limited to 'tools/bwa.nix')
-rw-r--r-- | tools/bwa.nix | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/tools/bwa.nix b/tools/bwa.nix index 90a8bd3..6fb7d71 100644 --- a/tools/bwa.nix +++ b/tools/bwa.nix @@ -3,18 +3,18 @@ with bionix; rec { - app2 = pkgs.callPackage ./bwa-mem2-app.nix {}; + app2 = pkgs.callPackage ./bwa-mem2-app.nix { }; /* Align read against a reference: defaults to bwa-mem */ align = bionix.bwa.mem; /* Align reads against a reference using bwa-mem - Type: bwa-mem :: {ref :: fasta, bamOutput :: bool, ...} -> {input1, input2} -> bam/sam + Type: bwa-mem :: {ref :: fasta, bamOutput :: bool, ...} -> {input1, input2} -> bam/sam */ mem = callBionixE ./bwa-mem.nix; mem2 = callBionixE ./bwa-mem2.nix; /* Creates an reference index for BWA - Type: index :: {...} -> fasta -> BWA index + Type: index :: {...} -> fasta -> BWA index */ index = callBionixE ./bwa-index.nix; index2 = callBionixE ./bwa-index2.nix; |