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authorJustin Bedo <cu@cua0.org>2019-06-20 08:23:30 +1000
committerJustin Bedo <cu@cua0.org>2019-08-29 09:08:04 +1000
commitfbe7543726f4321e3cb11c2fa503c27df14ac8fd (patch)
treea678a7e24123ab9a34e4f91120fcc0dcf52dea18 /tools/cnvkit-scatter.nix
parent0df02e2866b910c012afa3bc24ceb7fdf9cdf6d5 (diff)
CNVkit: merge into nixpkgs
Diffstat (limited to 'tools/cnvkit-scatter.nix')
-rw-r--r--tools/cnvkit-scatter.nix2
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/cnvkit-scatter.nix b/tools/cnvkit-scatter.nix
index f9dc7f6..2899584 100644
--- a/tools/cnvkit-scatter.nix
+++ b/tools/cnvkit-scatter.nix
@@ -9,7 +9,7 @@ with types;
stage {
name = "cnvkit-scatter";
- buildInputs = [ cnvkit.app ];
+ buildInputs = with pkgs; [ pkgs.python3Packages.cnvkit ];
buildCommand = ''
cnvkit.py scatter -s ${input}/*.cn{s,r} -o plot.pdf
cp plot.pdf $out