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| author | Justin Bedo <cu@cua0.org> | 2018-11-22 10:43:54 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2018-11-22 10:43:54 +1100 |
| commit | 24ee2349c16f159f2627665938fd76d599055a9a (patch) | |
| tree | 54a5bce88dc1403f67f58457c2b27882bc32d193 /tools/gridss-annotateVariants.nix | |
| parent | 90dd48b019ff7bf9e74d202c1deace6a0896cde5 (diff) | |
gridss: fix configure file optional string error
Diffstat (limited to 'tools/gridss-annotateVariants.nix')
| -rw-r--r-- | tools/gridss-annotateVariants.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/gridss-annotateVariants.nix b/tools/gridss-annotateVariants.nix index 33992c4..4422cd6 100644 --- a/tools/gridss-annotateVariants.nix +++ b/tools/gridss-annotateVariants.nix @@ -65,7 +65,7 @@ stdenv.mkDerivation rec { INPUT_VCF=input.vcf \ OUTPUT_VCF=out.vcf \ WORKING_DIR=$TMPDIR/ \ - ${optionalString config ("CONFIGURATION_FILE=" + gridssConfig config)} \ + ${optionalString (config != null) ("CONFIGURATION_FILE=" + gridssConfig config)} \ TMP_DIR=$TMPDIR/ mv out.vcf $out |