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| author | l-d-s <l@sdf.org> | 2018-11-15 16:37:30 +1100 |
|---|---|---|
| committer | l-d-s <l@sdf.org> | 2018-11-15 16:37:30 +1100 |
| commit | 121202685860545b1a0ddc0266452af5eeb83ce0 (patch) | |
| tree | 1c2e2690a905eb0580cc42f02d77529a7c773522 /tools/gridss-callVariants.nix | |
| parent | 5ad075658eea3d783bac013aae476dd22a371e71 (diff) | |
Need to test config != null
Diffstat (limited to 'tools/gridss-callVariants.nix')
| -rw-r--r-- | tools/gridss-callVariants.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/gridss-callVariants.nix b/tools/gridss-callVariants.nix index dc978fa..9afaf65 100644 --- a/tools/gridss-callVariants.nix +++ b/tools/gridss-callVariants.nix @@ -42,7 +42,7 @@ stdenv.mkDerivation rec { WORKER_THREADS=$NIX_BUILD_CORES \ TMP_DIR=. \ WORKING_DIR=. \ - ${optionalString config ("CONFIGURATION_FILE=" + gridssConfig config)} \ + ${optionalString (config != null) ("CONFIGURATION_FILE=" + gridssConfig config)} \ REFERENCE_SEQUENCE="ref.fa" \ ${concatMapStringsSep " " (i: "INPUT=\"${i}\"") inputs} \ OUTPUT="$out/gridss.vcf" \ |