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| author | Justin Bedo <cu@cua0.org> | 2020-10-13 08:39:36 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2020-10-13 08:39:36 +1100 |
| commit | 2e348fecd73df140c95089ad0304fd93088721f7 (patch) | |
| tree | 3d55f5e14d3b6ad810b57516a41c9cf15068d126 /tools/mutect-call.nix | |
| parent | 9cf1724895f001c625fba37d78f517acb6938e07 (diff) | |
mutect: fix app expression and tag output as vcf
Diffstat (limited to 'tools/mutect-call.nix')
| -rw-r--r-- | tools/mutect-call.nix | 1 |
1 files changed, 1 insertions, 0 deletions
diff --git a/tools/mutect-call.nix b/tools/mutect-call.nix index e2fe3a1..e98ba4b 100644 --- a/tools/mutect-call.nix +++ b/tools/mutect-call.nix @@ -38,4 +38,5 @@ stage { --input_file:tumour tumour.bam \ --out $out ''; + passthru.filetype = types.filetype.vcf { inherit ref; }; } |