refactor, add mosdepth, and fixes for bwa

1 files changed, 9 insertions, 0 deletions

diff --git a/tools/samtools.nix b/tools/samtools.nix
new file mode 100644
index 0000000..6fdbef5
--- /dev/null
+++ b/tools/samtools.nix
@@ -0,0 +1,9 @@
+{ bionix, nixpkgs }:
+
+with nixpkgs;
+
+{
+  index = attrs: callPackage ./samtools-index.nix attrs;
+  sort = attrs: callPackage ./samtools-sort.nix attrs;
+  faidx = attrs: callPackage ./samtools-faidx.nix attrs;
+}