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| author | Justin Bedo <cu@cua0.org> | 2020-08-25 15:13:13 +1000 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2020-08-25 15:15:35 +1000 |
| commit | 2cee6ee61240fbbc7f9684208b67eae8634404bf (patch) | |
| tree | 0609a94a17f571f7fec905fc1cf0e1ba06a75ed0 /tools/whisper-app.nix | |
| parent | 1db4fdf05830358c62de3734565c33b0a377d10b (diff) | |
whisper: app expression merged into nixpkgs
Diffstat (limited to 'tools/whisper-app.nix')
| -rw-r--r-- | tools/whisper-app.nix | 41 |
1 files changed, 0 insertions, 41 deletions
diff --git a/tools/whisper-app.nix b/tools/whisper-app.nix deleted file mode 100644 index c3f6445..0000000 --- a/tools/whisper-app.nix +++ /dev/null @@ -1,41 +0,0 @@ -{ stdenv, fetchFromGitHub, fetchurl }: - -stdenv.mkDerivation { - pname = "whisper"; - version = "2.0"; - - src = fetchFromGitHub { - owner = "refresh-bio"; - repo = "Whisper"; - rev = "v2.0"; - sha256 = "100p2pqhli123wnqkxrvjcwnmlvcp1rk63whh121jannnw81rh2m"; - }; - - patches = [ (fetchurl { - url = "https://github.com/refresh-bio/Whisper/commit/9ad77e7de68d91d9427cfbe6211e83cea89206ab.patch"; - sha256 = "0i1s70rq5z4b3yik76vs1cxri4n3mpgfn91k35b3mwzhpxvfh7nn";}) ]; - - preConfigure = '' - cd src - - # disable default static linking - sed -i 's/ -static / /' makefile - ''; - - installPhase = '' - mkdir -p $out/bin - cp whisper whisper-index $out/bin - ''; - - buildPhase = "make -j $NIX_BUILD_CORES"; - - meta = with stdenv.lib; { - description = "Short read sequence mapper"; - license = licenses.gpl3; - homepage = "https://github.com/refresh-bio/whisper"; - maintainers = with maintainers; [ jbedo ]; - platforms = platforms.linux; - }; - -} - |