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authorJustin Bedo <cu@cua0.org>2019-08-16 16:01:14 +1000
committerJustin Bedo <cu@cua0.org>2019-08-19 10:44:27 +1000
commite303a98cdc8749db939211ee7f691d07371f661a (patch)
tree060fe1e24aa59b0f0c3d9a768655088a90fca72a /tools
parentbc92717d8960f918b7903dab9315f068c705fe4c (diff)
snver: fix linking
Diffstat (limited to 'tools')
-rw-r--r--tools/snver-call.nix8
1 files changed, 4 insertions, 4 deletions
diff --git a/tools/snver-call.nix b/tools/snver-call.nix
index 645d151..5d80719 100644
--- a/tools/snver-call.nix
+++ b/tools/snver-call.nix
@@ -29,12 +29,12 @@ stage {
cp snver.failed.log $log
ln -s $log $out/snver.failed.log
cp snver.filter.vcf $filter
- ln -s $log $out/snver.filter.vcf
+ ln -s $filter $out/snver.filter.vcf
cp snver.indel.filter.vcf $indelfilter
- ln -s $log $out/snver.indel.filter.vcf
+ ln -s $indelfilter $out/snver.indel.filter.vcf
cp snver.indel.raw.vcf $indelraw
- ln -s $log $out/snver.indel.raw.vcf
+ ln -s $indelraw $out/snver.indel.raw.vcf
cp snver.raw.vcf $raw
- ln -s $log $out/snver.raw.vcf
+ ln -s $raw $out/snver.raw.vcf
'';
}