diff options
| -rw-r--r-- | lib/qsub.nix | 9 |
1 files changed, 8 insertions, 1 deletions
diff --git a/lib/qsub.nix b/lib/qsub.nix index 7c02144..528773e 100644 --- a/lib/qsub.nix +++ b/lib/qsub.nix @@ -26,6 +26,14 @@ SHELL=/bin/sh NIX_BUILD_CORES=${toString ppn} id=$(qsub -l nodes=1:ppn=${toString ppn},mem=${toString mem}gb,walltime=${walltime} ${script}) + + function cleanup { + qstat ''${id%%.} 2> /dev/null > /dev/null && qdel $id || true + sleep 5 + rm -rf ${tmpDir}/$id + } + trap cleanup INT TERM EXIT + cp -r $TMPDIR ${tmpDir}/$id set > ${tmpDir}/$id/nix-set while qstat ''${id%%.} 2> /dev/null > /dev/null ; do @@ -34,7 +42,6 @@ cat ${tmpDir}/$id/qsub-stderr >&2 cat ${tmpDir}/$id/qsub-stdout exitCode=$(cat ${tmpDir}/$id/qsub-exit) - rm -rf ${tmpDir}/$id exit $exitCode ''; |