diff options
Diffstat (limited to 'default.nix')
| -rw-r--r-- | default.nix | 25 |
1 files changed, 14 insertions, 11 deletions
diff --git a/default.nix b/default.nix index 10d2249..9f96a9d 100644 --- a/default.nix +++ b/default.nix @@ -2,18 +2,21 @@ let bionix = nixpkgs.lib.makeExtensible (self: - let callBionix = file: import file { bionix = self; nixpkgs = nixpkgs; }; - in with self; { - bwa = callBionix ./tools/bwa.nix; - crumble = callBionix ./tools/crumble.nix; - fastqc = callBionix ./tools/fastqc.nix; - gridss = callBionix ./tools/gridss.nix; - mosdepth = callBionix ./tools/mosdepth.nix; - platypus = callBionix ./tools/platypus.nix; - samtools = callBionix ./tools/samtools.nix; - strelka = callBionix ./tools/strelka.nix; + let callBionix = file: attrs: import file ({ bionix = self; nixpkgs = nixpkgs; } // attrs); + in with self; { + callBionix = callBionix; + id = x: x; + + bwa = callBionix ./tools/bwa.nix {}; + crumble = callBionix ./tools/crumble.nix {}; + fastqc = callBionix ./tools/fastqc.nix {}; + gridss = callBionix ./tools/gridss.nix {}; + mosdepth = callBionix ./tools/mosdepth.nix {}; + platypus = callBionix ./tools/platypus.nix {}; + samtools = callBionix ./tools/samtools.nix {}; + strelka = callBionix ./tools/strelka.nix {}; qsub = nixpkgs.callPackage ./lib/qsub.nix {}; - ref = callBionix ./lib/references.nix; + ref = callBionix ./lib/references.nix {}; }); in bionix |