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-rw-r--r--doc/tools-doc.nix1
-rw-r--r--doc/tools.xml1
2 files changed, 2 insertions, 0 deletions
diff --git a/doc/tools-doc.nix b/doc/tools-doc.nix
index b2cd7ba..e510209 100644
--- a/doc/tools-doc.nix
+++ b/doc/tools-doc.nix
@@ -24,6 +24,7 @@ stage {
nixdoc -c "$1" -d "$2" -f "$1.nix" | sed 's/lib\./bionix./g' |grep -v locations.xml > "$1.xml"
}
+ docgen bowtie 'Bowtie aligner'
docgen bwa 'BWA aligner'
docgen strelka 'Strelka2 variant caller'
diff --git a/doc/tools.xml b/doc/tools.xml
index f23dfeb..6b76bf7 100644
--- a/doc/tools.xml
+++ b/doc/tools.xml
@@ -8,6 +8,7 @@
xmlns:xi="http://www.w3.org/2001/XInclude"
xml:id="sec-tools">
<title>Tools</title>
+ <xi:include href="bowtie.xml" />
<xi:include href="bwa.xml" />
<xi:include href="strelka.xml" />
</section>