1 files changed, 50 insertions, 0 deletions
diff --git a/examples/ex-tnpair/default.nix b/examples/ex-tnpair/default.nix
new file mode 100644
index 0000000..f9581f8
--- /dev/null
+++ b/examples/ex-tnpair/default.nix
@@ -0,0 +1,50 @@
+{ bionix ? import <bionix> { } }:
+
+with bionix;
+with pkgs;
+with lib;
+
+let
+  pair = {
+    normal = {
+      type = "reference";
+      inputs = {
+        input1 = {
+          url =
+            "ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR275/009/ERR2752449/ERR2752449_1.fastq.gz";
+          sha256 =
+            "52f8b1b1a58b60c66ce566371dfe7a1301a787e8521a4ee41019bbf4f4d18dfe";
+        };
+        input2 = {
+          url =
+            "ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR275/009/ERR2752449/ERR2752449_2.fastq.gz";
+          sha256 =
+            "9d1e2ea772bbdf5ff3ee6a44d2d4244155b7d195a37745a2028628e2543cd8f0";
+        };
+      };
+    };
+
+    tumour = {
+      type = "melanoma";
+      inputs = {
+        input1 = {
+          url =
+            "ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR275/000/ERR2752450/ERR2752450_1.fastq.gz";
+          sha256 =
+            "2b3c98c36c2b2b6bc4682401a592a900f8eb2a143f93494ee448d6b075c12ec7";
+        };
+        input2 = {
+          url =
+            "ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR275/000/ERR2752450/ERR2752450_2.fastq.gz";
+          sha256 =
+            "0569beded708ef520dadca45ab8a70bd890caf441a0ad3749397f315dc1d2e8c";
+        };
+      };
+    };
+  };
+
+  fetch = s: mapAttrs (_: fetchFastQGZ) s.inputs;
+
+in import ./tnpair.nix {
+  inherit pair fetch bionix;
+}