diff options
Diffstat (limited to 'test-tnpair.nix')
-rw-r--r-- | test-tnpair.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/test-tnpair.nix b/test-tnpair.nix index 371ef81..40cb442 100644 --- a/test-tnpair.nix +++ b/test-tnpair.nix @@ -4,7 +4,7 @@ with pkgs; with lib; let - ref = ../bioshake/examples/ref.fa; + ref = ./example/ref.fa; alignWithRG = rg: callPackage ./tools/bwa.nix { inherit ref; flags = "-R'@RG\\tID:${rg}\\tSM:${rg}'";}; sort = callPackage ./tools/samtools-sort.nix { }; callVariants = callPackage ./tools/strelka.nix { inherit ref; }; |