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Diffstat (limited to 'test-tnpair.nix')
| -rw-r--r-- | test-tnpair.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/test-tnpair.nix b/test-tnpair.nix index f8c49ec..3260b7b 100644 --- a/test-tnpair.nix +++ b/test-tnpair.nix @@ -14,7 +14,7 @@ in with bionix; let - ref = ./example/ref.fa; + ref = { seq = ./example/ref.fa; }; alignWithRG = rg: bwa.align { inherit ref; flags = "-R'@RG\\tID:${rg}\\tSM:${rg}'";}; sort = samtools.sort {}; flagstat = samtools.flagstat {}; |