diff options
Diffstat (limited to 'tools/bwa-mem.nix')
| -rw-r--r-- | tools/bwa-mem.nix | 1 |
1 files changed, 1 insertions, 0 deletions
diff --git a/tools/bwa-mem.nix b/tools/bwa-mem.nix index 84038d9..6cefc57 100644 --- a/tools/bwa-mem.nix +++ b/tools/bwa-mem.nix @@ -39,4 +39,5 @@ stage { ''; passthru.filetype = if bamOutput then filetype.bam { inherit ref; sorting = sort.none { }; } else filetype.sam { inherit ref; sorting = sort.name { }; }; passthru.multicore = true; + stripStorePaths = !bamOutput; } |