diff options
Diffstat (limited to 'tools/bwa-mem.nix')
| -rw-r--r-- | tools/bwa-mem.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/bwa-mem.nix b/tools/bwa-mem.nix index 6e83a6d..ca9e6a8 100644 --- a/tools/bwa-mem.nix +++ b/tools/bwa-mem.nix @@ -17,7 +17,7 @@ stdenv.mkDerivation { name = "bwa-mem"; buildInputs = [ bwa bc ] ++ optional bamOutput samtools; buildCommand = '' - ln -s ${ref} ref.fa + ln -s ${ref.seq} ref.fa for f in ${bionix.bwa.index indexAttrs ref}/* ; do ln -s $f done |