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Diffstat (limited to 'tools/cnvkit-batch.nix')
| -rw-r--r-- | tools/cnvkit-batch.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/cnvkit-batch.nix b/tools/cnvkit-batch.nix index 114b6b9..5160867 100644 --- a/tools/cnvkit-batch.nix +++ b/tools/cnvkit-batch.nix @@ -22,7 +22,7 @@ assert (all sorted (normals ++ tumours)); stage { name = "cnvkit"; - buildInputs = [ cnvkit.app ]; + buildInputs = with pkgs; [ python3Packages.cnvkit ]; buildCommand = '' ln -s ${ref} ref.fa ln -s ${samtools.faidx indexAttrs ref} ref.fa.fai |