diff options
Diffstat (limited to 'tools/gridss-assemble.nix')
-rw-r--r-- | tools/gridss-assemble.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/tools/gridss-assemble.nix b/tools/gridss-assemble.nix index 9afb213..b61f28a 100644 --- a/tools/gridss-assemble.nix +++ b/tools/gridss-assemble.nix @@ -27,7 +27,7 @@ let ln -s ${input} $WRKDIR/$BASENAME.sv.bam ln -s ${bionix.samtools.index indexAttrs input} $WRKDIR/$BASENAME.sv.bai for f in ${bionix.gridss.collectMetrics collectMetricsAttrs input}/* ; do - ln -s $f $WRKDIR/$BASENAME.''${f#*.} + ln -s $f $WRKDIR/$BASENAME.''${f##*.} done ''; in |