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-rw-r--r--tools/gridss-computeSamTags.nix12
1 files changed, 9 insertions, 3 deletions
diff --git a/tools/gridss-computeSamTags.nix b/tools/gridss-computeSamTags.nix
index de44478..e07f6a5 100644
--- a/tools/gridss-computeSamTags.nix
+++ b/tools/gridss-computeSamTags.nix
@@ -1,5 +1,10 @@
-{ bionix, bwaIndexAttrs ? { }, faidxAttrs ? { }, flags ? null, config ? null
-, heapSize ? "1G" }:
+{ bionix
+, bwaIndexAttrs ? { }
+, faidxAttrs ? { }
+, flags ? null
+, config ? null
+, heapSize ? "1G"
+}:
with bionix;
with lib;
@@ -11,7 +16,8 @@ let
ref = matchFiletype "gridss-computeSamTags" { bam = x: x.ref; } input;
sorted = matchFileSorting "gridss-computeSamTags" { name = _: true; } input;
-in assert (sorted);
+in
+assert sorted;
stage rec {
name = "gridss-computeSamTags";