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Diffstat (limited to 'tools/hisat2-align.nix')
| -rw-r--r-- | tools/hisat2-align.nix | 1 |
1 files changed, 1 insertions, 0 deletions
diff --git a/tools/hisat2-align.nix b/tools/hisat2-align.nix index 0a1eb25..736d848 100644 --- a/tools/hisat2-align.nix +++ b/tools/hisat2-align.nix @@ -36,4 +36,5 @@ stage { ''; passthru.filetype = if bamOutput then filetype.bam { inherit ref; sorting = sort.none { }; } else filetype.sam { inherit ref; sorting = sort.name { }; }; passthru.multicore = true; + stripStorePaths = !bamOutput; } |