diff options
Diffstat (limited to 'tools')
| -rw-r--r-- | tools/minimap2-align.nix | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/tools/minimap2-align.nix b/tools/minimap2-align.nix index 14c88a5..7164ace 100644 --- a/tools/minimap2-align.nix +++ b/tools/minimap2-align.nix @@ -15,11 +15,11 @@ with types; with compression; let - fa = f: matchFiletype "minmap2-ref" { fa = _: f; } f; - fq = f: matchFiletype "minmap2-input" { fq = _: f; gz = matchFiletype' "minmap2-input" { fq = _: f; }; } f; + fa = f: matchFiletype "minimap2-ref" { fa = _: f; } f; + fq = f: matchFiletype "minimap2-input" { fq = _: f; gz = matchFiletype' "minimap2-input" { fq = _: f; }; } f; in stage { - name = "minmap2-align"; + name = "minimap2-align"; buildInputs = with pkgs; [ minimap2 bc ] ++ optional bamOutput samtools; buildCommand = '' ln -s ${fa ref} ref.fa |