Age | Commit message (Collapse) | Author | |
---|---|---|---|
2020-12-21 | snpeff: dbnsfp update | Justin Bedo | |
2020-11-18 | add encode blacklist to references | Justin Bedo | |
2020-02-14 | add gdrive downloader | Justin Bedo | |
- fetch dbNSFP automatically via gdrive.pl | |||
2019-11-29 | snpeff: GRCh37.87 -> GRCh37.75 | Justin Bedo | |
2019-09-25 | grch37: add dbsnp | Justin Bedo | |
2019-09-25 | grch38.31 → grch38.32 | Justin Bedo | |
2019-09-25 | add grch37 | Justin Bedo | |
2019-07-08 | ensembl: init gtf and gff3 | Justin Bedo | |
2019-07-08 | ensembl: abstract version | Justin Bedo | |
2019-06-12 | grcm38: fix typo in name of ensembl transcripts | Justin Bedo | |
2019-06-11 | references: fix file mode (remove executable flag) | Justin Bedo | |
2019-02-15 | ref: missing pkg scope on gawk | Justin Bedo | |
2019-02-06 | ref-grch38-snpeff-db: fix pkg scope | Justin Bedo | |
2019-01-23 | stage: change to stdenvNoCC | Justin Bedo | |
2019-01-11 | ucscgenes: fix url to correct hg38 | Justin Bedo | |
2019-01-10 | ref: add UCSC gene annotations | Justin Bedo | |
2019-01-09 | large refactor | Justin Bedo | |
- use bionix.pkgs instead of nixpkgs - replace stdenv.mkDerivation with stage | |||
2019-01-08 | snpeff: init | Justin Bedo | |
2018-11-14 | Add ensembl mouse transcriptome | Justin Bedo | |
2018-11-02 | kallisto: init | Justin Bedo | |
2018-10-26 | init: cosmic & dbsnp for grch38 | Justin Bedo | |
2018-10-05 | implement types | Justin Bedo | |
2018-10-04 | Fix typo in reference name | Justin Bedo | |
2018-10-03 | Use http rather than ftp for mm10 | l-d-s | |
2018-10-03 | fix indenting and syntax error | Justin Bedo | |
2018-10-03 | refactor reference location to lib | Justin Bedo | |