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2018-10-24Fix platypus bugJustin Bedo
2018-10-23Allow building bwa-mem with one coreJustin Bedo
2018-10-23Simplify infercnv-appJustin Bedo
2018-10-23Wrap inferCNVJustin Bedo
Resolves #8
2018-10-08Add identity to compression functionsJustin Bedo
2018-10-08Fix type in samtools-viewJustin Bedo
2018-10-05implement typesJustin Bedo
2018-10-04Refactor referencesJustin Bedo
2018-10-04Refactor to use bionix tree directlyJustin Bedo
2018-09-28Add crumbleJustin Bedo
2018-09-28Change mosdepth plotting to multisampleJustin Bedo
2018-09-28Fix missing index for mosdepthJustin Bedo
2018-09-27Allow flag passing to bwa indexJustin Bedo
2018-09-26Missing GRIDSS filesJustin Bedo
2018-09-26move bwa index to parametersJustin Bedo
2018-09-26Fix mosdepthJustin Bedo
2018-09-26Fix fastqcJustin Bedo
2018-09-26Add flagstat and fastqcJustin Bedo
2018-09-26refactor, add mosdepth, and fixes for bwaJustin Bedo
2018-09-24Working test-tnpairl-d-s
2018-09-20Add example TNPairJustin Bedo
2018-09-20Wrap some tools and make an example pipelineJustin Bedo
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