aboutsummaryrefslogtreecommitdiff
path: root/tools/samtools-flagstat.nix
blob: 57d8bb6b8f9ba49def3bfeacda98a4dc3de46ec9 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
{ bionix
}:

input:

with bionix;
with lib;

stage {
  name = "samtools-index";
  buildInputs = with pkgs; [ samtools ];
  buildCommand = "samtools flagstat -@ $NIX_BUILD_CORES ${input} > $out";
}