| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 7 days | bugfix: avoid case sensitivityHEADmaster | Justin Bedo | |
| MacOS does not use a case sensitive file system, hence dedumi.hs and Dedumi.hs collided. | |||
| 2024-04-18 | add licence | Justin Bedo | |
| 2024-03-28 | update gitignore | Justin Bedo | |
| 2024-03-27 | cleanup | Justin Bedo | |
| 2024-03-20 | add benchmarking | Justin Bedo | |
| 2024-03-20 | add gitignore | Justin Bedo | |
| 2024-03-20 | fix sloppy fastq parsing | Justin Bedo | |
| Previously chunked on @, which prevented it being used in quality scores | |||
| 2023-11-07 | allow configuration via argv | Justin Bedo | |
| 2023-08-18 | add tests and bugfix for small BGZip files | Justin Bedo | |
| 2023-08-16 | switch to streaming-commons and handle BGZip | Justin Bedo | |
| 2023-08-16 | remove lazy bytestrings | Justin Bedo | |
| 2023-08-16 | increase filter size | Justin Bedo | |
| 2023-08-16 | switch zlib bindings | Justin Bedo | |
| This resolves a memory leak during unparsing. Speed is faster now overall too. # Please enter the commit message for your changes. Lines starting # with '#' will be ignored, and an empty message aborts the commit. # # On branch master # Your branch is up to date with 'origin/master'. # # Changes to be committed: # modified: Data/FastQ.hs # modified: package.yaml # | |||
| 2023-08-16 | bugfix: correctly seed filepath | Justin Bedo | |
| 2023-08-09 | hash part of the sequence to add locality | Justin Bedo | |
| 2023-08-04 | prefer speed to compression | Justin Bedo | |
| 2023-08-03 | switch to cloudflare zlib | Justin Bedo | |
| 2023-08-03 | tidy code | Justin Bedo | |
| 2023-08-03 | add legacy build support | Justin Bedo | |
| 2023-08-03 | tidy, more fusion, handle different read headers | Justin Bedo | |
| 2023-08-02 | first full implementation | Justin Bedo | |
| 2023-08-02 | initial fastq streaming | Justin Bedo | |
 |
index : dedumi.git | |
| UMI deduplication for paired end sequencing |
| summaryrefslogtreecommitdiff |