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-rw-r--r-- | man/pmt.Rd | 33 |
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diff --git a/man/pmt.Rd b/man/pmt.Rd new file mode 100644 index 0000000..c9e0250 --- /dev/null +++ b/man/pmt.Rd @@ -0,0 +1,33 @@ +\name{pmt} +\alias{pmt} +\title{Poisson Margin Test} +\description{ + Computes p-values for two sets of counts using the Poisson Margin Test. +} +\usage{ +pmt(a, b) +} +\arguments{ + \item{a}{ + Vector of counts +} + \item{b}{ + Vector of counts +} +} +\details{ + This function computes the Poisson Margin Test (PMT) for two sets of counts. +} +\value{ + A vector of log10 p-values is returned, corresponding to the input vectors. +} +\references{ +Kowalczyk, A., Bedő, J., Conway, T., Beresford-Smith, B., 2011. The Poisson margin test for normalization-free significance analysis of NGS data. Journal of Computational Biology 18, 391–400. doi:10.1089/cmb.2010.0272 +} +\author{ + Justin Bedő +} +%\examples{ +%} +\keyword{NGS} +\keyword{Poisson} |